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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs213762 chr1:41583610 T/C 5.99E-12 489 17.47 17.77 14.92 KM Plot
THCA rs213763 chr1:41583526 C/T 6.07E-12 489 17.47 17.77 14.92 KM Plot
THCA rs213764 chr1:41583069 A/G 6.27E-12 487 17.47 17.77 14.93 KM Plot
THCA rs213766 chr1:41581963 T/C 6.07E-12 489 17.47 17.77 14.93 KM Plot
THCA rs213767 chr1:41581312 A/G 6.07E-12 489 17.47 17.77 14.93 KM Plot
THCA rs213768 chr1:41618442 A/T 4.34E-8 487 17.47 17.75 14.92 KM Plot
THCA rs2143103 chr1:22430069 G/A 1.48E-9 479 15.8 17.73 9.47 KM Plot
THCA rs2143346 chr6:26198449 C/G 2.21E-8 490 4.75 16.8 15.63 KM Plot
THCA rs2143347 chr6:26198494 C/T 1.61E-6 489 15.63 16.72 4.75 KM Plot
THCA rs2144788 chr1:41532444 G/A 3.61E-12 489 17.7 17.75 14.93 KM Plot
THCA rs2144790 chr1:41519800 A/G 3.77E-12 488 17.7 17.73 14.93 KM Plot
THCA rs2152548 chr10:81802667 G/A 0.000249 489 16.08 15.87 11.73 KM Plot
THCA rs2152550 chr10:81818509 G/A 0.000259 488 16.2 15.98 11.73 KM Plot
THCA rs2155232 chr11:57041378 A/G 1.85E-10 490 16.23 14.33 17.7 KM Plot
THCA rs2155233 chr11:57041992 T/C 8.08E-11 489 16.13 14.9 20.77 KM Plot